Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Nucleobase, Nucleoside, Nucleotide And Nucleic Acid Metabolic Process (GO:0006139) Genes Targeted by hsa-mir-1294 in B-CLL Leukemia Haslinger Cluster 35 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 35. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1294 GO:0006139 4849 CNOT3 CCR4-NOT transcription complex, subunit 3 [Source:HGNC Symbol;Acc:7879] zzz999 Yes 11165 NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 [Source:HGNC Symbol;Acc:8050] zzz999 Yes 1822 ATN1 atrophin 1 [Source:HGNC Symbol;Acc:3033] T Yes 8106 PABPN1 poly(A) binding protein, nuclear 1 [Source:HGNC Symbol;Acc:8565] zzz999 Yes 7049 TGFBR3 transforming growth factor, beta receptor III [Source:HGNC Symbol;Acc:11774] T 9344 TAOK2 TAO kinase 2 [Source:HGNC Symbol;Acc:16835] T 9726 ZNF646 zinc finger protein 646 [Source:HGNC Symbol;Acc:29004] zzz999 Yes 23248 RPRD2 regulation of nuclear pre-mRNA domain containing 2 [Source:HGNC Symbol;Acc:29039] zzz999 83637 ZMIZ2 zinc finger, MIZ-type containing 2 [Source:HGNC Symbol;Acc:22229] T Yes 23189 KANK1 KN motif and ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:19309] zzz999 3660 IRF2 interferon regulatory factor 2 [Source:HGNC Symbol;Acc:6117] zzz999 Yes 11273 ATXN2L ataxin 2-like [Source:HGNC Symbol;Acc:31326] T 22893 BAHD1 bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:29153] P T Yes 22839 DLGAP4 discs, large (Drosophila) homolog-associated protein 4 [Source:HGNC Symbol;Acc:24476] P T 6305 SBF1 SET binding factor 1 [Source:HGNC Symbol;Acc:10542] zzz999 7536 SF1 splicing factor 1 [Source:HGNC Symbol;Acc:12950] P Yes 7916 PRRC2A proline-rich coiled-coil 2A [Source:HGNC Symbol;Acc:13918] zzz999 9112 MTA1 metastasis associated 1 [Source:HGNC Symbol;Acc:7410] zzz999 Yes 23641 LDOC1 leucine zipper, down-regulated in cancer 1 [Source:HGNC Symbol;Acc:6548] zzz999 57326 PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 [Source:HGNC Symbol;Acc:21199] zzz999 Yes 10163 WASF2 WAS protein family, member 2 [Source:HGNC Symbol;Acc:12733] T 80228 ORAI2 ORAI calcium release-activated calcium modulator 2 [Source:HGNC Symbol;Acc:21667] zzz999 65108 MARCKSL1 MARCKS-like 1 [Source:HGNC Symbol;Acc:7142] zzz999 7535 ZAP70 zeta-chain (TCR) associated protein kinase 70kDa [Source:HGNC Symbol;Acc:12858] zzz999 26993 AKAP8L A kinase (PRKA) anchor protein 8-like [Source:HGNC Symbol;Acc:29857] zzz999 7343 UBTF upstream binding transcription factor, RNA polymerase I [Source:HGNC Symbol;Acc:12511] zzz999 Yes 11040 PIM2 pim-2 oncogene [Source:HGNC Symbol;Acc:8987] zzz999 2288 FKBP4 FK506 binding protein 4, 59kDa [Source:HGNC Symbol;Acc:3720] zzz999 1785 DNM2 dynamin 2 [Source:HGNC Symbol;Acc:2974] T Yes 1676 DFFA DNA fragmentation factor, 45kDa, alpha polypeptide [Source:HGNC Symbol;Acc:2772] zzz999 Yes 9091 PIGQ phosphatidylinositol glycan anchor biosynthesis, class Q [Source:HGNC Symbol;Acc:14135] zzz999 11140 CDC37 cell division cycle 37 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1735] zzz999 10014 HDAC5 histone deacetylase 5 [Source:HGNC Symbol;Acc:14068] T Yes 3241 HPCAL1 hippocalcin-like 1 [Source:HGNC Symbol;Acc:5145] zzz999 2962 GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa [Source:HGNC Symbol;Acc:4652] T Yes 10498 CARM1 coactivator-associated arginine methyltransferase 1 [Source:HGNC Symbol;Acc:23393] P T Yes 9230 RAB11B RAB11B, member RAS oncogene family [Source:HGNC Symbol;Acc:9761] zzz999 10155 TRIM28 tripartite motif containing 28 [Source:HGNC Symbol;Acc:16384] zzz999 Yes 3665 IRF7 interferon regulatory factor 7 [Source:HGNC Symbol;Acc:6122] zzz999 Yes 10298 PAK4 p21 protein (Cdc42/Rac)-activated kinase 4 [Source:HGNC Symbol;Acc:16059] zzz999 3972 LHB luteinizing hormone beta polypeptide [Source:HGNC Symbol;Acc:6584] zzz999 6576 SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 [Source:HGNC Symbol;Acc:10979] zzz999 5709 PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 [Source:HGNC Symbol;Acc:9560] zzz999 Yes 127544 RNF19B ring finger protein 19B [Source:HGNC Symbol;Acc:26886] zzz999 23152 CIC capicua homolog (Drosophila) [Source:HGNC Symbol;Acc:14214] zzz999 Yes 8242 KDM5C lysine (K)-specific demethylase 5C [Source:HGNC Symbol;Acc:11114] T Yes 10948 STARD3 StAR-related lipid transfer (START) domain containing 3 [Source:HGNC Symbol;Acc:17579] zzz999 9513 FXR2 fragile X mental retardation, autosomal homolog 2 [Source:HGNC Symbol;Acc:4024] T 5452 POU2F2 POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:9213] T Yes 23636 NUP62 nucleoporin 62kDa [Source:HGNC Symbol;Acc:8066] zzz999 Yes 126208 ZNF787 zinc finger protein 787 [Source:HGNC Symbol;Acc:26998] zzz999 Yes 599 BCL2L2 BCL2-like 2 [Source:HGNC Symbol;Acc:995] P T 9796 PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein [Source:HGNC Symbol;Acc:16865] T 10221 TRIB1 tribbles homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:16891] P T Yes 6610 SMPD2 sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Source:HGNC Symbol;Acc:11121] zzz999 23144 ZC3H3 zinc finger CCCH-type containing 3 [Source:HGNC Symbol;Acc:28972] zzz999 Yes 311 ANXA11 annexin A11 [Source:HGNC Symbol;Acc:535] T 4599 MX1 myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) [Source:HGNC Symbol;Acc:7532] zzz999 10945 KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 [Source:HGNC Symbol;Acc:6304] zzz999 10489 LRRC41 leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:16917] T 334 APLP2 amyloid beta (A4) precursor-like protein 2 [Source:HGNC Symbol;Acc:598] zzz999 2531 KDSR 3-ketodihydrosphingosine reductase [Source:HGNC Symbol;Acc:4021] T 9400 RECQL5 RecQ protein-like 5 [Source:HGNC Symbol;Acc:9950] zzz999 Yes 1820 ARID3A AT rich interactive domain 3A (BRIGHT-like) [Source:HGNC Symbol;Acc:3031] zzz999 Yes 4779 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 [Source:HGNC Symbol;Acc:7781] T Yes 135 ADORA2A adenosine A2a receptor [Source:HGNC Symbol;Acc:263] zzz999 Yes 6919 TCEA2 transcription elongation factor A (SII), 2 [Source:HGNC Symbol;Acc:11614] zzz999 Yes 9149 DYRK1B dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:HGNC Symbol;Acc:3092] zzz999 Yes 6929 TCF3 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) [Source:HGNC Symbol;Acc:11633] T Yes 1018 CDK3 cyclin-dependent kinase 3 [Source:HGNC Symbol;Acc:1772] zzz999 2907 GRINA glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) [Source:HGNC Symbol;Acc:4589] zzz999 9146 HGS hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:4897] zzz999 51341 ZBTB7A zinc finger and BTB domain containing 7A [Source:HGNC Symbol;Acc:18078] zzz999 Yes 4650 MYO9B myosin IXB [Source:HGNC Symbol;Acc:7609] T 489 ATP2A3 ATPase, Ca++ transporting, ubiquitous [Source:HGNC Symbol;Acc:813] zzz999 Yes 23241 PACS2 phosphofurin acidic cluster sorting protein 2 [Source:HGNC Symbol;Acc:23794] P T 6794 STK11 serine/threonine kinase 11 [Source:HGNC Symbol;Acc:11389] zzz999 10964 IFI44L interferon-induced protein 44-like [Source:HGNC Symbol;Acc:17817] zzz999 10445 MCRS1 microspherule protein 1 [Source:HGNC Symbol;Acc:6960] zzz999 8535 CBX4 chromobox homolog 4 [Source:HGNC Symbol;Acc:1554] zzz999 Yes 6602 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:11106] T Yes 4297 MLL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) [Source:HGNC Symbol;Acc:7132] P T Yes 1454 CSNK1E casein kinase 1, epsilon [Source:HGNC Symbol;Acc:2453] zzz999 Yes

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